CDS
| Accession Number | TCMCG006C45451 |
| gbkey | CDS |
| Protein Id | XP_013737673.1 |
| Location | complement(join(39775671..39775970,39776115..39776318,39776392..39776581,39776735..39777075,39777185..39777277,39777384..39777563,39777674..39777737,39777830..39778041,39778135..39778227,39778316..39778495,39778729..39778864,39778947..39779197,39779303..39779416,39779504..39779701,39780028..39780114)) |
| Gene | LOC106440526 |
| GeneID | 106440526 |
| Organism | Brassica napus |
Protein
| Length | 880aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013882219.2 |
| Definition | beta-adaptin-like protein C [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko04121 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12392
[VIEW IN KEGG] ko:K16281 [VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04142
[VIEW IN KEGG] map04142 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0005911 [VIEW IN EMBL-EBI] GO:0009506 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0030054 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0055044 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGCGGGCATGATTCCAAATACTTCTCGACGACGAAGAAGGGAGAGATCCCTGAGCTCAAGGAAGAGCTCAATTCACAGTACAAGGATAAGAGGAAAGATGCTGTTAAGAAGGTTATTGCGGCAATGACTGTTGGAAAGGATGTTTCATCTCTTTTCACTGATGTACTCAATTGCATGCAAACGGAGAATCTGGAGCTCAAGAAGCTTGTTTACTTGTATCTCATTAACTACGCTAAAAGCCAGCCTGATCTTGCTATCCTCGCTGTTAATACTTTTGTTAAGGATTCACAAGATCCGAATCCGTTGATCCGTGCTTTGGCTGTGCGGACAATGGGCTGCATTCGTGTTGATAAGATCACTGAGTATTTGTGCGATCCCCTTCAGAAATGCCTAAAGGATGATGATCCATATGTTCGCAAGACAGCAGCTGTTTGCGTTGCCAAATTGTTTGACATAAATGCTGAGTTAGTCGAGGATAGGGGTTTCCTTGAAGCCTTGAAGGATTTAATATCAGACAACAATCCGATGGTTGTGGCAAATGCTGTAGCAGCCCTTGCAGAGATACAAGACAAGAGTGCTAGTCCCATCTTTGAAATTAATAGTGTTACCCTCACAAAGCTCCTTACAGCTTTGAACGAATGTACTGAGTGGGGTCAAGTTTTTATATTGGATTCGCTGTCAAGGTATAAAGCAGCTGATCCTCGTGAAGCTGAAAATATTGTTGAGAGAGTCACTCCAAGGTTACAACATGCCAATTGCGCTGTCGTGCTTTCAGCCGTTAAGATGATCCTTCAGCAGATGGAGCTAATTACTAGTACAGATGTGATTCGAAATCTTTGCAAAAAGATGGCCCCTCCCCTAGTTACATTGCTTTCTGCAGAACCTGAGATCCAATATGTTGCACTTCGTAACATTAACCTTATTGTCCAAAAAAGGCCCACTATTCTTGCCCATGAAATCAAGGTGTTCTTCTGCAAGTATAATGATCCTATTTATGTCAAGATGGAGAAGTTGGAGATTATGATAAAACTTGCTTCTGACAGAAACATAGACCAGGTTCTTCTGGAGTTCAAAGAGTATGCCACGGAAGTAGATGTTGATTTTGTTCGGAAGGCTGTTCGTGCAATAGGCAGATGTGCCATCAAACTGGAAAGAGCAGCAGAACGGTGCATCAGTGTTTTACTTGAGCTGATCAAGATCAAAGTAAACTACGTTGTTCAGGAGGCCATCATAGTCATCAAAGATATCTTTAGAAGATATCCAAACACGTATGAGTCCATAATTGCAACACTCTGTGAGAGTCTAGACACATTGGATGAACCAGAAGCGAAGGCATCTATGATTTGGATCATTGGTGAATATGCTGAGAGAATCGACAATGCTGACGAACTACTTGAAAGCTTCCTGGAGAATTTCCCTGAAGAACCAGCACAGGTCCAGCTGCAGCTTCTTACAGCGACAGTCAAACTATTTCTGAAGAAGCCAACTGAAGGCCCACAACAAATGATTCAGGTTGTCTTGAATAATGCTACTGTGGAGACAGATAATCCTGATCTCAGGGATCGTGCATACATCTACTGGCGTCTTCTATCTACTGATCCCGAGGCGGCGAAGGATGTTGTTTTAGCTGAAAAGCCTGTGATTACTGACGACTCAAATCAACTTGAGCCGTCACTCCTGGATGAGCTGCTCGCAAATATTTCAACCTTGTCCTCTGTGTATCACAAGCCGCCAGAGGCTTTTGTAACTCGCTTGAAACCCACAGTTCAGAAAACGGAAGATGAGGACTATGTGGAAGGGGGCGAAACAGAGATATCTGGTAATCCGGTTGATGGTGCAGCTCCTGTAGCGGCTGCTCCAGCCCCTGTGCCTGATCTCCTAGGTGACCTAATGGGAACAGATGATGCTGCAATTGTCCCAGTAGATGATTACACAACTCTGTCAGGTCCTCCACTGCATGTTGTCCTGCCAGCATCAAGCGGTCAAGGTCTGCAAATTAGCGCTCAGTTAACCCGACAAGATGGTCAAGTGTTCTACAGTATGCTCCTCGAGAACAGCTCGCAGTCGGTTCTCGATGGATTCATGATTCAGTTCAACAAAAACTCATTCGGCCTTGCAGCTGCAGGACCTCTTCAGGTTCAACCTCTGCAACCCGGAGAATCTGCCAGGACAATGTTGCCAATGGTATTGTCCCAGAACATGTCTGACGGGCCCACCAACTCTCTTTTGCAAGTTGCCGTCAAAAACAATCAGCCGCCTGTCAAGCACTTCACAGATAAGATTGTACTTCACGCTCTTTGCTCAGAAGATGGTAGGATGGAACGCGGAACCTTCCTCGAGACGTGGAGGTCTTTACCGGATTCAAACGAGGTCCAGAAGGATTTTCCTGGGATAACCATAACGAGCATTGACTCAACGCTCGACTTGCTAGCCGCGTCAAACATGTTCTTCATAGCAAAGCGCAAAAACGGAAACCAAGACGTGCTGTATCTATCAGCCAAAGCCCCAAAAGGCGTACCATTCTTGATCGAACTAACGGCCATGGTGGGTCAGCCTGGTCTTAAATGTGCGGTCAAGACTCCAACCCCTGAGATCGCTCCTCTCTTCTTTGAATCCCTTGAAATGCTCTTCAAGTCTTGA |
| Protein: MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVLNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAVCVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEIQDKSASPIFEINSVTLTKLLTALNECTEWGQVFILDSLSRYKAADPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLEPSLLDELLANISTLSSVYHKPPEAFVTRLKPTVQKTEDEDYVEGGETEISGNPVDGAAPVAAAPAPVPDLLGDLMGTDDAAIVPVDDYTTLSGPPLHVVLPASSGQGLQISAQLTRQDGQVFYSMLLENSSQSVLDGFMIQFNKNSFGLAAAGPLQVQPLQPGESARTMLPMVLSQNMSDGPTNSLLQVAVKNNQPPVKHFTDKIVLHALCSEDGRMERGTFLETWRSLPDSNEVQKDFPGITITSIDSTLDLLAASNMFFIAKRKNGNQDVLYLSAKAPKGVPFLIELTAMVGQPGLKCAVKTPTPEIAPLFFESLEMLFKS |